functional annotation

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1
A multi-source domain annotation pipeline for quantitative metagenomic and metatranscriptomic functional profiling.
Ugarte, Ari;Vicedomini, Riccardo;Bernardes, Juliana;Carbone, Alessandra;
2018 microbiome DOI: 10.1186/s40168-018-0... 293 views
2
Phylogeny-corrected identification of microbial gene families relevant to human gut colonization.
Bradley, Patrick H;Nayfach, Stephen;Pollard, Katherine S;
2018 PLoS computational biology DOI: 10.1371/journal.pcbi... 215 views
3
Functional annotation of de novo variants from healthy individuals.
Lee, Jean;Hong, Sung Eun;
2019 genomics & informatics DOI: 10.5808/GI.2019.17.4... 237 views
4
Effective/cost effective interventions of child mental health problems in low- and middle-income countries (LAMIC): Systematic review.
Grande, Antonio Jose;Ribeiro, Wagner Silva;Faustino, Christine;de Miranda, Claudio Torres;Mcdaid, Da...
2020 Medicine DOI: 10.1097/MD.000000000... 223 views
5
Neuronal fibroblast growth factor 22 signaling during development, but not in adults, is involved in anhedonia.
Terauchi, Akiko;Durlacher, Emily;Pitino, Julia;Umemori, Hisashi;
2019 neuroreport DOI: 10.1097/WNR.00000000... 220 views
6
TADA-a machine learning tool for functional annotation-based prioritisation of pathogenic CNVs.
Hertzberg, Jakob;Mundlos, Stefan;Vingron, Martin;Gallone, Giuseppe;
2022 Genome biology DOI: 67 34 views
7
FORGEdb: a tool for identifying candidate functional variants and uncovering target genes and mechanisms for complex diseases.
Breeze, Charles E;Haugen, Eric;Gutierrez-Arcelus, María;Yao, Xiaozheng;Teschendorff, Andrew;Beck, St...
2024 Genome biology DOI: 3 41 views

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Motif environment probabilistic model domain annotation metagenomic metatranscriptomic healthy population whole genome sequencing de novo variants Machine learning copy-number-variants pathogenicity prediction structural variants tads gene regulation genome-wide association study (gwas) activity-by-contact (abc) crispr (clustered regularly interspaced short palindromic repeats) dnase-seq expression quantitative trait locus (eqtl)