whole genome sequencing

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1
Resolving a clinical tuberculosis outbreak using palaeogenomic genome reconstruction methodologies.
Jones, Rhys;Velasco, Marcela Sandoval;Harris, Llinos G;Morgan, Sue;Temple, Mark;Ruddy, Michael C;Wil...
2019 tuberculosis (edinburgh, scotland) DOI: S1472-9792(19)30175-... 245 views
2
Towards standardisation: comparison of five whole genome sequencing (WGS) analysis pipelines for detection of epidemiologically linked tuberculosis cases.
Jajou, Rana;Kohl, Thomas A;Walker, Timothy;Norman, Anders;Cirillo, Daniela Maria;Tagliani, Elisa;Nie...
2019 euro surveillance : bulletin europeen sur les mala... DOI: 10.2807/1560-7917.ES... 314 views
3
Combining genomics and epidemiology to analyse bi-directional transmission of in a multi-host system.
Crispell, Joseph;Benton, Clare H;Balaz, Daniel;De Maio, Nicola;Ahkmetova, Assel;Allen, Adrian;Biek,...
2019 eLife DOI: 10.7554/eLife.45833 387 views
4
Genotyping of Mycobacterium tuberculosis spreading in Hanoi, Vietnam using conventional and whole genome sequencing methods.
Maeda, Shinji;Hijikata, Minako;Hang, Nguyen Thi Le;Thuong, Pham Huu;Huan, Hoang Van;Hoang, Nguyen Ph...
2019 Infection, genetics and evolution : journal of mol... DOI: S1567-1348(19)30333-... 312 views
5
Functional annotation of de novo variants from healthy individuals.
Lee, Jean;Hong, Sung Eun;
2019 genomics & informatics DOI: 10.5808/GI.2019.17.4... 241 views
6
Effective/cost effective interventions of child mental health problems in low- and middle-income countries (LAMIC): Systematic review.
Grande, Antonio Jose;Ribeiro, Wagner Silva;Faustino, Christine;de Miranda, Claudio Torres;Mcdaid, Da...
2020 Medicine DOI: 10.1097/MD.000000000... 227 views
7
Neuronal fibroblast growth factor 22 signaling during development, but not in adults, is involved in anhedonia.
Terauchi, Akiko;Durlacher, Emily;Pitino, Julia;Umemori, Hisashi;
2019 neuroreport DOI: 10.1097/WNR.00000000... 222 views
8
IS-Mediated Transfer of as the Main Route of Resistance Transmission During a Polyclonal, Multispecies Outbreak in a German Hospital.
Weber, Robert E;Pietsch, Michael;Frühauf, Andre;Pfeifer, Yvonne;Martin, Maria;Luft, Dirk;Gatermann,...
2019 Frontiers in microbiology DOI: 10.3389/fmicb.2019.0... 213 views
9
Genomic Insights Into the Complex: An Update.
Jagielski, Tomasz;Borówka, Paulina;Bakuła, Zofia;Lach, Jakub;Marciniak, Błażej;Brzostek, Anna;Dziade...
2019 Frontiers in microbiology DOI: 10.3389/fmicb.2019.0... 200 views
10
Plasma pharmacokinetics of bedaquiline administered by nasogastric tube in an intensive care unit.
Dang, E;Sayagh, F;Lê, M P;Neuville, M;Sinnah, F;Timsit, J-F;Peytavin, G;
2020 the international journal of tuberculosis and lung... DOI: 10.5588/ijtld.19.022... 310 views
11
A systematic review and meta-analysis of first-line tuberculosis drug concentrations and treatment outcomes.
Perumal, R;Naidoo, K;Naidoo, A;Ramachandran, G;Requena-Mendez, A;Sekaggya-Wiltshire, C;Mpagama, S G;...
2020 the international journal of tuberculosis and lung... DOI: 10.5588/ijtld.19.002... 211 views
12
[Chromosomal abnormalities in spontaneous miscarriage specimens detected by combinatorial probe anchor synthesis-based high-throughput low coverage whole genome sequencing].
Wang, X H;Bai, R F;Zhou, Y;Dong, H;Ji, Y P;Hou, D X;Wu, R G M L;Yang, X L;Ji, X P;
2019 zhonghua fu chan ke za zhi DOI: 10.3760/cma.j.issn.0... 283 views
13
molecular characterisation of salmonella serovars anatum and ealing associated with two historical outbreaks, linked to contaminated powdered infant formula
;Lynda Gunn;Sarah Finn;Daniel Hurley;Li Bai;Li Bai;Ellen Wall;Carol Iversen;John E Threlfall;Séamus...
2016 journal of magnetic resonance (san diego, calif :... DOI: 10.3389/fmicb.2016.0... 175 views
14
livestock-associated methicillin resistant staphylococcus aureus (la-mrsa) clonal complex (cc) 398 isolated from uk animals belongs to european lineages.
;Meenaxi Sharma;Javier Nunez-Garcia;Angela Kearns;Michel Doumith;Patrick Rik Butaye;Maria Angeles Ar...
2016 journal of magnetic resonance (san diego, calif :... DOI: 10.3389/fmicb.2016.0... 217 views
15
naturally occurring diversity helps to reveal genes of adaptive importance in legumes.
;Laurent eGentzbittel;Laurent eGentzbittel;Stieg U Andersen;Cécile eBen;Cécile eBen;Martina eRickaue...
2015 phytochemistry letters DOI: 10.3389/fpls.2015.00... 187 views
16
response: commentary: probing genomic aspects of the multi-host pathogen clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors
;Raymond Kiu;Raymond Kiu;Lindsay J. Hall
2018 journal of magnetic resonance (san diego, calif :... DOI: 10.3389/fmicb.2018.0... 220 views
17
editorial: game changer - next generation sequencing and its impact on food microbiology
;Jennifer Ronholm;Jennifer Ronholm
2018 journal of magnetic resonance (san diego, calif :... DOI: 10.3389/fmicb.2018.0... 245 views
18
emergence of vibrio cholerae o1 sequence type 75 in taiwan
;Yueh-Hua Tu;Bo-Han Chen;Yu-Ping Hong;Ying-Shu Liao;Yi-Syong Chen;Yen-Yi Liu;Ru-Hsiou Teng;You-Wun W...
2020 bragantia DOI: 10.3201/eid2601.1909... 258 views
19
next generation sequencing methods for diagnosis of epilepsy syndromes
;Paul Dunn;Cassie L. Albury;Neven Maksemous;Miles C. Benton;Heidi G. Sutherland;Robert A. Smith;Lari...
2018 chemical record (new york, ny) DOI: 10.3389/fgene.2018.0... 166 views
20
characterization of the growth of chlamydia trachomatis in in vitro-generated stratified epithelium
;Ana T. Nogueira;Ana T. Nogueira;Kristin M. Braun;Rey A. Carabeo
2017 electronic physician DOI: 10.3389/fcimb.2017.0... 246 views

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