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Genome biology

ISSN 1474-760X· EN

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42.3 / 100
Journament Score
Below Average
Ranked #4,839 of 33,995 indexed journals
24 Articles
Accessibility 35
Engagement 31
The Journament Score combines content quality, publication ethics and transparency, editorial standards, publication regularity, accessibility and reader engagement into a single 0–100 figure. It is recalculated as new articles and metadata are indexed.

About This Journal

Short Name Genome Biol
Abbreviated Name genome biol
ISSN 1474-760X
URL https://genomebiology.biomedcentral.com

Publications Per Year

Articles (24)

2015
Extensive identification and analysis of conserved small ORFs in animals
Mackowiak SD;Zauber H;Bielow C;Thiel D;Kutz K;Calviello L;Mastrobuoni G;Rajewsky N;Kempa S;Selbach M;Obermayer B;;
Vol. 16 , pp. -
572 views Abstract
2019
GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes
Bolívar, Paulina;Guéguen, Laurent;Duret, Laurent;Ellegren, Hans;Mugal, Carina F.;
Vol. 20 , No. 1 , pp. 1-13
489 views Abstract
2014
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I Love;Wolfgang Huber;Simon Anders;Michael I Love;Wolfgang Huber;Simon Anders;
Vol. 15 , No. 12 , pp. 1-21
448 views DOI Abstract
2020
Gene content evolution in the arthropods.
Thomas, Gregg W C;Dohmen, Elias;Hughes, Daniel S T;Murali, Shwetha C;Poelchau, Monica;Glastad, Karl;Anstead, Clare A;Ayoub, Nadia A;Batterham, Phillip;Bellair, Michelle;Binford, Greta J;Chao, Hsu;Chen, Yolanda H;Childers, Christopher;Dinh, Huyen;Doddapaneni, Harsha Vardhan;Duan, Jian J;Dugan, Shannon;Esposito, Lauren A;Friedrich, Markus;Garb, Jessica;Gasser, Robin B;Goodisman, Michael A D;Gundersen-Rindal, Dawn E;Han, Yi;Handler, Alfred M;Hatakeyama, Masatsugu;Hering, Lars;Hunter, Wayne B;Ioannidis, Panagiotis;Jayaseelan, Joy C;Kalra, Divya;Khila, Abderrahman;Korhonen, Pasi K;Lee, Carol Eunmi;Lee, Sandra L;Li, Yiyuan;Lindsey, Amelia R I;Mayer, Georg;McGregor, Alistair P;McKenna, Duane D;Misof, Bernhard;Munidasa, Mala;Munoz-Torres, Monica;Muzny, Donna M;Niehuis, Oliver;Osuji-Lacy, Nkechinyere;Palli, Subba R;Panfilio, Kristen A;Pechmann, Matthias;Perry, Trent;Peters, Ralph S;Poynton, Helen C;Prpic, Nikola-Michael;Qu, Jiaxin;Rotenberg, Dorith;Schal, Coby;Schoville, Sean D;Scully, Erin D;Skinner, Evette;Sloan, Daniel B;Stouthamer, Richard;Strand, Michael R;Szucsich, Nikolaus U;Wijeratne, Asela;Young, Neil D;Zattara, Eduardo E;Benoit, Joshua B;Zdobnov, Evgeny M;Pfrender, Michael E;Hackett, Kevin J;Werren, John H;Worley, Kim C;Gibbs, Richard A;Chipman, Ariel D;Waterhouse, Robert M;Bornberg-Bauer, Erich;Hahn, Matthew W;Richards, Stephen;
Vol. 21 , No. 1 , pp. 15
434 views DOI Abstract
2015
Extensive identification and analysis of conserved small ORFs in animals
Sebastian D. Mackowiak;Henrik Zauber;Chris Bielow;Denise Thiel;Kamila Kutz;Lorenzo Calviello;Guido Mastrobuoni;Nikolaus Rajewsky;Stefan Kempa;Matthias Selbach;Benedikt Obermayer;Sebastian D. Mackowiak;Henrik Zauber;Chris Bielow;Denise Thiel;Kamila Kutz;Lorenzo Calviello;Guido Mastrobuoni;Nikolaus Rajewsky;Stefan Kempa;Matthias Selbach;Benedikt Obermayer;
Vol. 16 , No. 1 , pp. 1-21
431 views DOI Abstract
2013
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim;Geo Pertea;Cole Trapnell;Harold Pimentel;Ryan Kelley;Steven L Salzberg;Daehwan Kim;Geo Pertea;Cole Trapnell;Harold Pimentel;Ryan Kelley;Steven L Salzberg;
Vol. 14 , No. 4 , pp. 1-13
397 views DOI Abstract
2006
GENCODE: producing a reference annotation for ENCODE
Harrow J;Denoeud F;Frankish A;Reymond A;Chen CK;Chrast J;Lagarde J;Gilbert JG;Storey R;Swarbreck D;Rossier C;Ucla C;Hubbard T;Antonarakis SE;Guigo R;;
Vol. 7 Suppl 1 , No. Suppl 1 , pp. -
389 views Abstract
2018
Tensorial blind source separation for improved analysis of multi-omic data.
Teschendorff, Andrew E;Jing, Han;Paul, Dirk S;Virta, Joni;Nordhausen, Klaus;
Vol. 19 , No. 1 , pp. 76
386 views DOI Abstract
2019
Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation.
Gurumurthy, Channabasavaiah B;O'Brien, Aidan R;Quadros, Rolen M;Adams, John;Alcaide, Pilar;Ayabe, Shinya;Ballard, Johnathan;Batra, Surinder K;Beauchamp, Marie-Claude;Becker, Kathleen A;Bernas, Guillaume;Brough, David;Carrillo-Salinas, Francisco;Chan, Wesley;Chen, Hanying;Dawson, Ruby;DeMambro, Victoria;D'Hont, Jinke;Dibb, Katharine M;Eudy, James D;Gan, Lin;Gao, Jing;Gonzales, Amy;Guntur, Anyonya R;Guo, Huiping;Harms, Donald W;Harrington, Anne;Hentges, Kathryn E;Humphreys, Neil;Imai, Shiho;Ishii, Hideshi;Iwama, Mizuho;Jonasch, Eric;Karolak, Michelle;Keavney, Bernard;Khin, Nay-Chi;Konno, Masamitsu;Kotani, Yuko;Kunihiro, Yayoi;Lakshmanan, Imayavaramban;Larochelle, Catherine;Lawrence, Catherine B;Li, Lin;Lindner, Volkhard;Liu, Xian-De;Lopez-Castejon, Gloria;Loudon, Andrew;Lowe, Jenna;Jerome-Majewska, Loydie A;Matsusaka, Taiji;Miura, Hiromi;Miyasaka, Yoshiki;Morpurgo, Benjamin;Motyl, Katherine;Nabeshima, Yo-Ichi;Nakade, Koji;Nakashiba, Toshiaki;Nakashima, Kenichi;Obata, Yuichi;Ogiwara, Sanae;Ouellet, Mariette;Oxburgh, Leif;Piltz, Sandra;Pinz, Ilka;Ponnusamy, Moorthy P;Ray, David;Redder, Ronald J;Rosen, Clifford J;Ross, Nikki;Ruhe, Mark T;Ryzhova, Larisa;Salvador, Ane M;Alam, Sabrina Shameen;Sedlacek, Radislav;Sharma, Karan;Smith, Chad;Staes, Katrien;Starrs, Lora;Sugiyama, Fumihiro;Takahashi, Satoru;Tanaka, Tomohiro;Trafford, Andrew W;Uno, Yoshihiro;Vanhoutte, Leen;Vanrockeghem, Frederique;Willis, Brandon J;Wright, Christian S;Yamauchi, Yuko;Yi, Xin;Yoshimi, Kazuto;Zhang, Xuesong;Zhang, Yu;Ohtsuka, Masato;Das, Satyabrata;Garry, Daniel J;Hochepied, Tino;Thomas, Paul;Parker-Thornburg, Jan;Adamson, Antony D;Yoshiki, Atsushi;Schmouth, Jean-Francois;Golovko, Andrei;Thompson, William R;Lloyd, K C Kent;Wood, Joshua A;Cowan, Mitra;Mashimo, Tomoji;Mizuno, Seiya;Zhu, Hao;Kasparek, Petr;Liaw, Lucy;Miano, Joseph M;Burgio, Gaetan;
Vol. 20 , No. 1 , pp. 171
385 views DOI Abstract
2019
MPRAnalyze: statistical framework for massively parallel reporter assays.
Ashuach, Tal;Fischer, David S;Kreimer, Anat;Ahituv, Nadav;Theis, Fabian J;Yosef, Nir;
Vol. 20 , No. 1 , pp. 183
384 views DOI Abstract
2025
catGRANULE 2.0: accurate predictions of liquid-liquid phase separating proteins at single amino acid resolution
Michele Monti; Jonathan Fiorentino; Dimitrios Miltiadis-Vrachnos; Giorgio Bini; Tiziana Cotrufo; Natalia Sanchez de Groot; Alexandros Armaos; G. Tartaglia
28 views DOI Abstract
2024
FORGEdb: a tool for identifying candidate functional variants and uncovering target genes and mechanisms for complex diseases.
Breeze, Charles E;Haugen, Eric;Gutierrez-Arcelus, María;Yao, Xiaozheng;Teschendorff, Andrew;Beck, Stephan;Dunham, Ian;Stamatoyannopoulos, John;Franceschini, Nora;Machiela, Mitchell J;Berndt, Sonja I;
Vol. 25 , No. 1 , pp. 3
112 views DOI Abstract
2024
Rapid and sensitive detection of genome contamination at scale with FCS-GX.
Astashyn, Alexander;Tvedte, Eric S;Sweeney, Deacon;Sapojnikov, Victor;Bouk, Nathan;Joukov, Victor;Mozes, Eyal;Strope, Pooja K;Sylla, Pape M;Wagner, Lukas;Bidwell, Shelby L;Brown, Larissa C;Clark, Karen;Davis, Emily W;Smith-White, Brian;Hlavina, Wratko;Pruitt, Kim D;Schneider, Valerie A;Murphy, Terence D;
Vol. 25 , No. 1 , pp. 60
192 views DOI Abstract
2022
TADA-a machine learning tool for functional annotation-based prioritisation of pathogenic CNVs.
Hertzberg, Jakob;Mundlos, Stefan;Vingron, Martin;Gallone, Giuseppe;
Vol. 23 , No. 1 , pp. 67
126 views DOI Abstract
2020
Gene content evolution in the arthropods.
Thomas, Gregg W C;Dohmen, Elias;Hughes, Daniel S T;Murali, Shwetha C;Poelchau, Monica;Glastad, Karl;Anstead, Clare A;Ayoub, Nadia A;Batterham, Phillip;Bellair, Michelle;Binford, Greta J;Chao, Hsu;Chen, Yolanda H;Childers, Christopher;Dinh, Huyen;Doddapaneni, Harsha Vardhan;Duan, Jian J;Dugan, Shannon;Esposito, Lauren A;Friedrich, Markus;Garb, Jessica;Gasser, Robin B;Goodisman, Michael A D;Gundersen-Rindal, Dawn E;Han, Yi;Handler, Alfred M;Hatakeyama, Masatsugu;Hering, Lars;Hunter, Wayne B;Ioannidis, Panagiotis;Jayaseelan, Joy C;Kalra, Divya;Khila, Abderrahman;Korhonen, Pasi K;Lee, Carol Eunmi;Lee, Sandra L;Li, Yiyuan;Lindsey, Amelia R I;Mayer, Georg;McGregor, Alistair P;McKenna, Duane D;Misof, Bernhard;Munidasa, Mala;Munoz-Torres, Monica;Muzny, Donna M;Niehuis, Oliver;Osuji-Lacy, Nkechinyere;Palli, Subba R;Panfilio, Kristen A;Pechmann, Matthias;Perry, Trent;Peters, Ralph S;Poynton, Helen C;Prpic, Nikola-Michael;Qu, Jiaxin;Rotenberg, Dorith;Schal, Coby;Schoville, Sean D;Scully, Erin D;Skinner, Evette;Sloan, Daniel B;Stouthamer, Richard;Strand, Michael R;Szucsich, Nikolaus U;Wijeratne, Asela;Young, Neil D;Zattara, Eduardo E;Benoit, Joshua B;Zdobnov, Evgeny M;Pfrender, Michael E;Hackett, Kevin J;Werren, John H;Worley, Kim C;Gibbs, Richard A;Chipman, Ariel D;Waterhouse, Robert M;Bornberg-Bauer, Erich;Hahn, Matthew W;Richards, Stephen;
Vol. 21 , No. 1 , pp. 15
434 views DOI Abstract
2019
Distinct epigenetic features of tumor-reactive CD8+ T cells in colorectal cancer patients revealed by genome-wide DNA methylation analysis.
Yang, Rui;Cheng, Sijin;Luo, Nan;Gao, Ranran;Yu, Kezhuo;Kang, Boxi;Wang, Li;Zhang, Qiming;Fang, Qiao;Zhang, Lei;Li, Chen;He, Aibin;Hu, Xueda;Peng, Jirun;Ren, Xianwen;Zhang, Zemin;
Vol. 21 , No. 1 , pp. 2
286 views DOI Abstract
2019
Paragraph: a graph-based structural variant genotyper for short-read sequence data.
Chen, Sai;Krusche, Peter;Dolzhenko, Egor;Sherman, Rachel M;Petrovski, Roman;Schlesinger, Felix;Kirsche, Melanie;Bentley, David R;Schatz, Michael C;Sedlazeck, Fritz J;Eberle, Michael A;
Vol. 20 , No. 1 , pp. 291
217 views DOI Abstract
2019
GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes
Bolívar, Paulina;Guéguen, Laurent;Duret, Laurent;Ellegren, Hans;Mugal, Carina F.;
Vol. 20 , No. 1 , pp. 1-13
489 views Abstract
2019
MMSplice: modular modeling improves the predictions of genetic variant effects on splicing
Cheng, Jun;Nguyen, Thi Yen Duong;Cygan, Kamil J.;Çelik, Muhammed Hasan;Fairbrother, William G.;Avsec, žiga;Gagneur, Julien;
Vol. 20 , No. 1 , pp. 1-15
272 views Abstract
2019
MPRAnalyze: statistical framework for massively parallel reporter assays.
Ashuach, Tal;Fischer, David S;Kreimer, Anat;Ahituv, Nadav;Theis, Fabian J;Yosef, Nir;
Vol. 20 , No. 1 , pp. 183
384 views DOI Abstract
Journament Score
42.3/100 · Below Average
Ranked #4,839 of 33,995
Journament

Overall Quality Score

42.3/100

Tier: Below Average

The Journament Overall Quality Score is a comprehensive metric that evaluates academic journals across multiple dimensions including engagement, accessibility, diversity, innovation, and community impact.

This score helps researchers, institutions, and publishers understand the holistic quality and impact of a journal beyond traditional metrics.

Engagement Score

30.7/100

Measures user interactions, views, citations, and community involvement with this journal's content.

Higher engagement scores indicate that the journal's content is actively being read, cited, and discussed within the academic community.

Accessibility Score

35.0/100

Evaluates how easily researchers can access journal content, including open access availability, ISSN registration, and indexing.

This metric considers factors such as paywalls, open access policies, and availability across different academic databases and search engines.

Diversity Score

30.0/100

Assesses geographic and institutional diversity of authors, editorial board composition, and topic breadth.

A diverse journal publishes work from various geographic regions, institutions, and covers a broad range of topics within its field.

Innovation Score

40.0/100

Evaluates research novelty, interdisciplinary work, and emerging topics based on AI analysis of article abstracts.

This score reflects how much the journal publishes cutting-edge research, explores new methodologies, and bridges different academic disciplines.

Community Impact Score

37.0/100

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Timeliness Score

75.0/100

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0.0/100

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0.0/100

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Author Diversity + Interdisciplinary Value (8%)

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0.0/100

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