BMC Bioinformatics

Bioinformatics

Database : the journal of biological databases and curation

methods in molecular biology (clifton, nj)

Frontiers in immunology

turkish journal of mathematics and computer science

BMC genomics

bioRxiv : the preprint server for biology

[1] Teaching an Introductory Programming Course to Non-Computer Science Majors Using SageMath

[2] Single Cell Explorer, collaboration-driven tools to leverage large-scale single cell RNA-seq data.

[3] The Essential Toolbox of Data Science: Python, R, Git, and Docker.

[4] A-Lister: a tool for analysis of differentially expressed omics entities across multiple pairwise comparisons.

[5] PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.

[6] A late-binding, distributed, NoSQL warehouse for integrating patient data from clinical trials.

[7] teetool -- a probabilistic trajectory analysis tool

[8] sympy: symbolic computing in python

[9] the brian simulator

[10] book review: computing for biologists: python programming and principles (isbn 978-1-107-64218-8)

[11] wekapyscript: classification, regression, and filter schemes for weka implemented in python

[12] vision egg: an open-source library for realtime visual stimulus generation

[13] hardware-accelerated interactive data visualization for neuroscience in python

[14] annotated checklist of the recent and extinct pythons (serpentes, pythonidae), with notes on nomenclature, taxonomy, and distribution

[15] python-based geometry preparation and simulation visualization toolkits for steps

[16] please: the python low-energy electron analysis suite – enabling rapid analysis of leem and leed data

[17] topographica: building and analyzing map-level simulations from python, c/c++, matlab, nest, or neuron components

[18] DARTS: an open-source Python pipeline for Ca microdomain analysis in live cell imaging data.

[19] scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution.

[20] ADMET-AI: A machine learning ADMET platform for evaluation of large-scale chemical libraries.

[21] Tkinter 8.4 reference: a GUI for Python

[22] Mathgraph: A python package to compute energy and topological indices of graphs

[23] Enhancing PowerFactory Dynamic Models with Python for Rapid Prototyping

[24] Knot_pull-python package for biopolymer smoothing and knot detection.

[25] CFDOpt: A python generic and modular shape optimization platform driven by high accuracy CFD analysis code-S-duct and 2D/3D wing optimization cases-Inverse design optimization for 2D airfoils

[26] CpGtools: A Python Package for DNA Methylation Analysis.

[27] The Essential Toolbox of Data Science: Python, R, Git, and Docker.

[28] Development of GUI Applications for Groundwater Modeling Using Python.

[29] A Python framework for efficient use of pre-computed Green's functions in seismological and other physical forward and inverse source problems

[30] A python based support vector regression model for prediction of COVID19 cases in India

[31] HTSeq—a Python framework to work with high-throughput sequencing data

[32] description of pythonella scleruri n. sp. (apicomplexa: eimeriidae) from a brazilian bird rufous-breasted-leaftosser sclerurus scansor, 1835 (passeriformes: furnariidae)

[33] python for scientific computing education: modeling of queueing systems

[34] pyspace - a signal processing and classification environment in python

[35] aura: a multi-featured programming framework in python

[36] a data model of the climate and forecast metadata conventions (cf-1.6) with a software implementation (cf-python v2.1)

[37] PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.

[38] leveraging comparative genomics to identify and functionally characterize genes associated with sperm phenotypes in python bivittatus (burmese python)

[39] brian: a simulator for spiking neural networks in python

[40] group analysis in mne-python of evoked responses from a tactile stimulation paradigm: a pipeline for reproducibility at every step of processing, going from individual sensor space representations to an across-group source space representation

[41] python for collective intelligence and collaborative filtering

[42] sympy: symbolic computing in python

[43] peptidebuilder: a simple python library to generate model peptides

[44] book review: computing for biologists: python programming and principles (isbn 978-1-107-64218-8)

[45] pypsa: python for power system analysis

[46] wekapyscript: classification, regression, and filter schemes for weka implemented in python

[47] testen komplexer digitaler schaltungen mit python

[48] embedding a python interpreter into your program

[49] letters to the python papers

[50] hardware-accelerated interactive data visualization for neuroscience in python

[51] information-theoretical analysis of eeg microstate sequences in python

[52] in silico analysis of gene expression network components underlying pigmentation phenotypes in the python identified evolutionarily conserved clusters of transcription factor binding sites

[53] annotated checklist of the recent and extinct pythons (serpentes, pythonidae), with notes on nomenclature, taxonomy, and distribution

[54] python-based geometry preparation and simulation visualization toolkits for steps

[55] natter: a python natural image statistics toolbox

[56] designing semiconductor heterostructures with python

[57] please: the python low-energy electron analysis suite – enabling rapid analysis of leem and leed data

[58] a primer for working with the spatial interaction modeling (spint) module in the python spatial analysis library (pysal)

[59] topographica: building and analyzing map-level simulations from python, c/c++, matlab, nest, or neuron components

[60] a quasi-experimental design to evaluate the use of pythontutor on programming laboratory session

[61] el lenguaje de programación python

[62] PyOmeroUpload: A Python toolkit for uploading images and metadata to OMERO

[63] PyOmeroUpload: A Python toolkit for uploading images and metadata to OMERO [version 1; peer review: 2 approved]

[64] DARTS: an open-source Python pipeline for Ca microdomain analysis in live cell imaging data.