DNAPlotter: circular and linear interactive genome visualization

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ID: 302888
2008
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Ranked #276 of 835 articles by views in BMC Bioinformatics

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Abstract
Abstract Summary: DNAPlotter is an interactive Java application for generating circular and linear representations of genomes. Making use of the Artemis libraries to provide a user-friendly method of loading in sequence files (EMBL, GenBank, GFF) as well as data from relational databases, it filters features of interest to display on separate user-definable tracks. It can be used to produce publication quality images for papers or web pages. Availability: DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/ Contact: artemis@sanger.ac.uk
Reference Key
openalex_W2121703775 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Tim Carver, Nick Thomson, Alan J. Bleasby, Matthew Berriman, Julian Parkhill
Journal BMC Bioinformatics
Year 2008
DOI
10.1093/bioinformatics/btn578
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