ggseqlogo: a versatile R package for drawing sequence logos
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ID: 302525
2017
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Abstract
Sequence logos have become a crucial visualization method for studying underlying sequence patterns in the genome. Despite this, there remains a scarcity of software packages that provide the versatility often required for such visualizations. ggseqlogo is an R package built on the ggplot2 package that aims to address this issue. ggseqlogo offers native illustration of publication-ready DNA, RNA and protein sequence logos in a highly customizable fashion with features including multi-logo plots, qualitative and quantitative colour schemes, annotation of logos and integration with other plots. The package is intuitive to use and seamlessly integrates into R analysis pipelines.ggseqlogo is released under the GNU licence and is freely available via CRAN-The Comprehensive R Archive Network https://cran.r-project.org/web/packages/ggseqlogo. A detailed tutorial can be found at https://omarwagih.github.io/ggseqlogo.wagih@ebi.ac.uk.
| Reference Key |
openalex_W2737196618
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|---|---|
| Authors | Omar Wagih |
| Journal | BMC Bioinformatics |
| Year | 2017 |
| DOI |
10.1093/bioinformatics/btx469
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| URL | |
| Keywords | Keywords not found |
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