rtracklayer: an R package for interfacing with genome browsers

Clicks: 3
ID: 302150
2009
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Abstract
Abstract Summary: The rtracklayer package supports the integration of existing genome browsers with experimental data analyses performed in R. The user may (i) transfer annotation tracks to and from a genome browser and (ii) create and manipulate browser views to focus on a particular set of annotations in a specific genomic region. Currently, the UCSC genome browser is supported. Availability: The package is freely available from http://www.bioconductor.org/. A quick-start vignette is included with the package. Contact: mflawren@fhcrc.org
Reference Key
openalex_W2099143842 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Michael Lawrence, Robert Gentleman, Vincent J. Carey
Journal BMC Bioinformatics
Year 2009
DOI
10.1093/bioinformatics/btp328
URL
https://academic.oup.com/bioinformatics/article-pdf/25/14/1841/606195/btp328.pdf
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