FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool

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ID: 301368
2017
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Abstract
FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an interactive dashboard designed to richly summarize individual sequencing runs. The dashboard groups samples in dropdowns for navigation among the data sets, utilizes human-readable configuration files to manipulate the pages and tabs, and is extensible with CSV data.FQC is implemented in Python 3 and Javascript, and is maintained under an MIT license. Documentation and source code is available at: https://github.com/pnnl/fqc .joseph.brown@pnnl.gov.
Reference Key
openalex_W2623802615 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Joseph Brown, Meg Pirrung, Lee Ann McCue
Journal BMC Bioinformatics
Year 2017
DOI
10.1093/bioinformatics/btx373
URL
https://academic.oup.com/bioinformatics/article-pdf/33/19/3137/25164862/btx373.pdf
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