STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins

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ID: 299063
2004
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Abstract
STRIDE is a software tool for secondary structure assignment from atomic resolution protein structures. It implements a knowledge-based algorithm that makes combined use of hydrogen bond energy and statistically derived backbone torsional angle information and is optimized to return resulting assignments in maximal agreement with crystallographers' designations. The STRIDE web server provides access to this tool and allows visualization of the secondary structure, as well as contact and Ramachandran maps for any file uploaded by the user with atomic coordinates in the Protein Data Bank (PDB) format. A searchable database of STRIDE assignments for the latest PDB release is also provided. The STRIDE server is accessible from http://webclu.bio.wzw.tum.de/stride/.
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openalex_W2133179696 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Matthias Heinig, Dmitrij Frishman
Journal Nucleic Acids Research
Year 2004
DOI
10.1093/nar/gkh429
URL
https://academic.oup.com/nar/article-pdf/32/suppl_2/W500/6210244/gkh429.pdf
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