PROMO: detection of known transcription regulatory elements using species-tailored searches

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ID: 294896
2002
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Abstract
Abstract Summary: We have developed a set of tools to construct positional weight matrices from known transcription factor binding sites in a species or taxon-specific manner, and to search for matches in DNA sequences. Availability: PROMO can be accessed online at http://www.lsi.upc.es/~alggen under the research link. Supplementary information: An example of the graphic interface (Figure 1) can be visualized at http://www.lsi.upc.es/~alggen/recerca/promo/figuraBioinformatics.html. Contact: peypoch@lsi.upc.es; m.alba@ucl.ac.uk * To whom correspondence should be addressed.
Reference Key
openalex_W2116102471 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Xavier Messeguer, Ruth Escudero, Domènec Farré, Óscar Núñez, Javier Martı́nez, M. Mar Albà
Journal BMC Bioinformatics
Year 2002
DOI
10.1093/bioinformatics/18.2.333
URL
https://academic.oup.com/bioinformatics/article-pdf/18/2/333/48850614/bioinformatics_18_2_333.pdf
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