TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
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ID: 291268
2003
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Abstract
TGICL is a pipeline for analysis of large Expressed Sequence Tags (EST) and mRNA databases in which the sequences are first clustered based on pairwise sequence similarity, and then assembled by individual clusters (optionally with quality values) to produce longer, more complete consensus sequences. The system can run on multi-CPU architectures including SMP and PVM.
| Reference Key |
openalex_W2101972919
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| Authors | Geo Pertea, Xiaoqiu Huang, Liang Feng, Valentin Antonescu, Răzvan Sultana, Svetlana Karamycheva, Yuandan Lee, Joseph White, Foo Cheung, Babak Parvizi, Jennifer Tsai, John Quackenbush |
| Journal | BMC Bioinformatics |
| Year | 2003 |
| DOI |
10.1093/bioinformatics/btg034
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| URL | |
| Keywords | Keywords not found |
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