PubChem 2023 update

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ID: 290608
2022
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Ranked #507 of 1,214 articles by views in Nucleic Acids Research

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Abstract
Abstract PubChem (https://pubchem.ncbi.nlm.nih.gov) is a popular chemical information resource that serves a wide range of use cases. In the past two years, a number of changes were made to PubChem. Data from more than 120 data sources was added to PubChem. Some major highlights include: the integration of Google Patents data into PubChem, which greatly expanded the coverage of the PubChem Patent data collection; the creation of the Cell Line and Taxonomy data collections, which provide quick and easy access to chemical information for a given cell line and taxon, respectively; and the update of the bioassay data model. In addition, new functionalities were added to the PubChem programmatic access protocols, PUG-REST and PUG-View, including support for target-centric data download for a given protein, gene, pathway, cell line, and taxon and the addition of the ‘standardize’ option to PUG-REST, which returns the standardized form of an input chemical structure. A significant update was also made to PubChemRDF. The present paper provides an overview of these changes.
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openalex_W4307468223 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulytė, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
Journal Nucleic Acids Research
Year 2022
DOI
10.1093/nar/gkac956
URL
https://academic.oup.com/nar/article-pdf/51/D1/D1373/48441598/gkac956.pdf
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