Automatic annotation of organellar genomes with DOGMA

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ID: 290113
2004
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Abstract
Abstract Summary: The Dual Organellar GenoMe Annotator (DOGMA) automates the annotation of organellar (plant chloroplast and animal mitochondrial) genomes. It is a Web-based package that allows the use of BLAST searches against a custom database, and conservation of basepairing in the secondary structure of animal mitochondrial tRNAs to identify and annotate genes. DOGMA provides a graphical user interface for viewing and editing annotations. Annotations are stored on our password-protected server to enable repeated sessions of working on the same genome. Finished annotations can be extracted for direct submission to GenBank. Availability: http://phylocluster.biosci.utexas.edu/dogma/ Supplementary information: Detailed documentation and tutorials for annotating both animal mitochondrial and plant chloroplast genomes can be found on the DOGMA home page.
Reference Key
openalex_W2147096538 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Stacia K. Wyman, Robert K. Jansen, Jeffrey L. Boore
Journal BMC Bioinformatics
Year 2004
DOI
10.1093/bioinformatics/bth352
URL
https://academic.oup.com/bioinformatics/article-pdf/20/17/3252/455701/bth352.pdf
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