Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs
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ID: 289924
1984
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Abstract
5′-Noncoding sequences have been tabulated for 211 messenger R'JAs from higher eukaryotic cells. The 5′-proximal AUG triplet serves as the initiator codon in 95% of the mRNAs examined. The most conspicuous conserved feature is the presence of a purine (most often A) three nucleotides upstream from the AUG initiator codon; only 6 of the mRNAs in the survey have a pyrimidine in that position. There is a predominance of C in positions −1, −2, −4 and −5, just upstream from the initiator codon. The sequence CCGACCAUG (G) thus emerges as a consensus sequence for eukaryotic initiation sites. The extent to which the ribosome binding site in a given mRNA matches the −1 to −5 consensus sequence varies: more than half of the mRNAs in the tabulation have 3 or 4 nucleotides in common with the CCACC consensus, but only ten mRNAs conform perfectly.
| Reference Key |
openalex_W2009105413
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| Authors | Marilyn Kozak |
| Journal | Nucleic Acids Research |
| Year | 1984 |
| DOI |
10.1093/nar/12.2.857
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| URL | |
| Keywords | Keywords not found |
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