WoLF PSORT: protein localization predictor

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ID: 289802
2007
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Abstract
WoLF PSORT is an extension of the PSORT II program for protein subcellular location prediction. WoLF PSORT converts protein amino acid sequences into numerical localization features; based on sorting signals, amino acid composition and functional motifs such as DNA-binding motifs. After conversion, a simple k-nearest neighbor classifier is used for prediction. Using html, the evidence for each prediction is shown in two ways: (i) a list of proteins of known localization with the most similar localization features to the query, and (ii) tables with detailed information about individual localization features. For convenience, sequence alignments of the query to similar proteins and links to UniProt and Gene Ontology are provided. Taken together, this information allows a user to understand the evidence (or lack thereof) behind the predictions made for particular proteins. WoLF PSORT is available at wolfpsort.org
Reference Key
openalex_W2158173168 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Paul Horton, Kyungjoon Park, Takeshi Obayashi, Nobuko FUJITA, Hideaki Harada, C.J. Adams-Collier, Kenta Nakai
Journal Nucleic Acids Research
Year 2007
DOI
10.1093/nar/gkm259
URL
https://academic.oup.com/nar/article-pdf/35/suppl_2/W585/9584204/gkm259.pdf
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