DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
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ID: 289678
2009
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Abstract
Abstract Summary: High-throughput RNA sequencing (RNA-seq) is rapidly emerging as a major quantitative transcriptome profiling platform. Here, we present DEGseq, an R package to identify differentially expressed genes or isoforms for RNA-seq data from different samples. In this package, we integrated three existing methods, and introduced two novel methods based on MA-plot to detect and visualize gene expression difference. Availability: The R package and a quick-start vignette is available at http://bioinfo.au.tsinghua.edu.cn/software/degseq Contact: xwwang@tsinghua.edu.cn; zhangxg@tsinghua.edu.cn Supplementary information: Supplementary data are available at Bioinformatics online.
| Reference Key |
openalex_W2119034410
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|---|---|
| Authors | Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xuegong Zhang |
| Journal | BMC Bioinformatics |
| Year | 2009 |
| DOI |
10.1093/bioinformatics/btp612
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| URL | |
| Keywords | Keywords not found |
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