GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
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ID: 289640
2019
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Abstract
The GTDB Toolkit (GTDB-Tk) provides objective taxonomic assignments for bacterial and archaeal genomes based on the Genome Taxonomy Database (GTDB). GTDB-Tk is computationally efficient and able to classify thousands of draft genomes in parallel. Here we demonstrate the accuracy of the GTDB-Tk taxonomic assignments by evaluating its performance on a phylogenetically diverse set of 10,156 bacterial and archaeal metagenome-assembled genomes.
| Reference Key |
openalex_W2986925300
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|---|---|
| Authors | Pierre-Alain Chaumeil, Aaron J. Mussig, Philip Hugenholtz, Donovan H. Parks |
| Journal | BMC Bioinformatics |
| Year | 2019 |
| DOI |
10.1093/bioinformatics/btz848
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| URL | |
| Keywords | Keywords not found |
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