ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins
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ID: 289456
2007
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Abstract
A major problem in structural biology is the recognition of errors in experimental and theoretical models of protein structures. The ProSA program (Protein Structure Analysis) is an established tool which has a large user base and is frequently employed in the refinement and validation of experimental protein structures and in structure prediction and modeling. The analysis of protein structures is generally a difficult and cumbersome exercise. The new service presented here is a straightforward and easy to use extension of the classic ProSA program which exploits the advantages of interactive web-based applications for the display of scores and energy plots that highlight potential problems spotted in protein structures. In particular, the quality scores of a protein are displayed in the context of all known protein structures and problematic parts of a structure are shown and highlighted in a 3D molecule viewer. The service specifically addresses the needs encountered in the validation of protein structures obtained from X-ray analysis, NMR spectroscopy and theoretical calculations. ProSA-web is accessible at https://prosa.services.came.sbg.ac.at
| Reference Key |
openalex_W1992192767
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|---|---|
| Authors | Markus Wiederstein, Manfred J. Sippl |
| Journal | Nucleic Acids Research |
| Year | 2007 |
| DOI |
10.1093/nar/gkm290
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| URL | |
| Keywords | Keywords not found |
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