DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

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ID: 289393
2017
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Abstract
We present version 6 of the DNA Sequence Polymorphism (DnaSP) software, a new version of the popular tool for performing exhaustive population genetic analyses on multiple sequence alignments. This major upgrade incorporates novel functionalities to analyze large data sets, such as those generated by high-throughput sequencing technologies. Among other features, DnaSP 6 implements: 1) modules for reading and analyzing data from genomic partitioning methods, such as RADseq or hybrid enrichment approaches, 2) faster methods scalable for high-throughput sequencing data, and 3) summary statistics for the analysis of multi-locus population genetics data. Furthermore, DnaSP 6 includes novel modules to perform single- and multi-locus coalescent simulations under a wide range of demographic scenarios. The DnaSP 6 program, with extensive documentation, is freely available at http://www.ub.edu/dnasp.
Reference Key
openalex_W2755331695 Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Julio Rozas, Albert Ferrer-Mata, Juan Carlos Sánchez-DelBarrio, Sara Guirao‐Rico, Pablo Librado, Sebastián E. Ramos‐Onsins, Alejandro Sánchez‐Gracia
Journal molecular biology and evolution
Year 2017
DOI
10.1093/molbev/msx248
URL
https://academic.oup.com/mbe/article-pdf/34/12/3299/21947023/msx248.pdf
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