snptracker: a swift tool for comprehensive tracking and unifying dbsnp rs ids and genomic coordinates of massive sequence variants

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ID: 202833
2016
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Abstract
The reference single nucleotide polymorphism (rs) ID in dbSNP (http://www.ncbi.nlm.nih.gov/SNP/) is a key resource identifier, which is widely used in human genetics and genomics studies. However, its application is often complicated by the varied IDs of different versions. Here, we developed a user-friendly tool, SNPTracker, for comprehensively tracking and unifying the rs IDs and genomic coordinates of massive sequence variants at a time. It worked perfectly, and had much higher accuracy and capacity than two alternative utilities in our proof-of-principle examples. SNPTracker will greatly facilitate genetic data exchange and integration in the postgenome-wide association study era.
Reference Key
deng2016g3:snptracker: Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors ;Jia-En Deng;Pak C. Sham;Miao-Xin Li
Journal separation and purification technology
Year 2016
DOI
10.1534/g3.115.021832
URL
http://g3journal.org/lookup/doi/10.1534/g3.115.021832
Keywords
single nucleotide polymorphism (snp)

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