evaluation of reference genes and normalization strategy for quantitative real-time pcr in human pancreatic carcinoma

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ID: 139782
2012
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Abstract
Histologically verified pairs (n = 10) of pancreatic tumors and non-neoplastic tissues were used for quantitative real-time PCR and the stability of 24 reference genes was analyzed with geNorm and NormFinder software. Raw Cq values correlated with the degree of RNA degradation. This correlation was abolished by normalization to Cq of 18S endogenous control gene. Both geNorm and NormFinder programs suggested EIF2B1, ELF1, MRPL19, and POP4 as the same most stable genes. We have thus identified suitable reference genes for future expression studies in pancreatic carcinoma. Normalization method reducing the effects of RNA degradation on the quality of results was also developed.
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mohelnikova-duchonova2012diseaseevaluation Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors ;Beatrice Mohelnikova-Duchonova;Martin Oliverius;Eva Honsova;Pavel Soucek
Journal international journal of psychology : journal international de psychologie
Year 2012
DOI
10.3233/DMA-2011-0875
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