Sequence analysis of the medium and small RNAs of impatiens necrotic spot virus reveals segment reassortment but not recombination.

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ID: 38904
2019
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Abstract
The complete sequence of the medium (M) and small (S) RNA genome segments were determined for twelve isolates of impatiens necrotic spot virus from eight plant species. The M- and S-RNAs of these isolates shared 97-99% and 93-98% nucleotide sequence identity, respectively, with the corresponding full-length sequences available in public databases. Phylogenetic analysis based on the M- or S-RNA sequences showed incongruence in the phylogenetic position of some isolates, suggesting intraspecies segment reassortment. The lack of phylogenetic discordance in individual and concatenated sequences of individual genes encoded by M- or S-RNAs suggests that segment reassortment rather than recombination is driving evolution of these INSV isolates.
Reference Key
adegbola2019sequencearchives Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Adegbola, Raphael O;Marshall, Spencer H;Batuman, Ozgur;Ullman, Diane E;Gilbertson, Robert L;Adkins, Scott;Naidu, Rayapati A;
Journal archives of virology
Year 2019
DOI
10.1007/s00705-019-04389-5
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