Nuclear export signal (NES) of transposases affects the transposition activity of mariner-like elements and of moso bamboo.
Clicks: 230
ID: 29163
2019
Article Quality & Performance Metrics
Overall Quality
Improving Quality
0.0
/100
Combines engagement data with AI-assessed academic quality
Reader Engagement
Steady Performance
65.0
/100
225 views
182 readers
Trending
AI Quality Assessment
Not analyzed
Abstract
and are two active -like elements (MLEs) cloned from moso bamboo ( (Carrière) J. Houz) genome possessing transposases that harbour nuclear export signal (NES) domain, but not any nuclear localization signal (NLS) domain. To understand the functions of NES in transposon activity, we have conducted two experiments, fluorescence and excision frequency assays in the yeast system. For this, by site-directed mutagenesis, three NES mutants were developed from each of the MLE. In the fluorescence assay, the mutants, , and along with the wild types () were fused with fluorescent proteins, enhanced yellow fluorescent protein (EYFP) and enhanced cyan fluorescent protein (ECFP) were co-transformed into yeast system. To differentiate protein localisation under the NES influence, ECFP alone was fused to wild and mutant NES domains either on N- or C-terminal and not to EYFP. Fluorescence assay revealed that blue fluorescence of ECFP was more intense than the red fluorescence of the EYFP in the yeast cell matrix. Further, ECFP had a wider localisation in the cellular matrix, but EYFP was largely located in the nucleus. The domain was related to the comparatively high spread of ECFP, while and indicated a low spread, implying that NES activity on nuclear export increased when the NES is made leucine-rich, while the signalling activity was reduced when the leucine content was lowered in the NES domain. In the transposon excision assay, the mutant and wild type NES of both the elements were integrated into an vector, and within the gene. Co-transformation of the vector together with non-autonomous transposons and NES-lacking transposases was used to assess the differential excision frequencies of the mutants NES domains. In both the MLEs, had the highest excision suppression, which was less than half of the excision frequency of the wild type. and elements showed, up to three times increase in transposon excision than the wild types. The results suggested that NES is an important regulator of nuclear export of transposase in elements and the mutation of the NES domains can either increase or decrease the export signalling. We speculate that in moso bamboo, NESs regulates the transposition activity of MLEs to maintain the genome integrity.
| Reference Key |
ramakrishnan2019nuclearmobile
Use this key to autocite in the manuscript while using
SciMatic Manuscript Manager or Thesis Manager
|
|---|---|
| Authors | Ramakrishnan, Muthusamy;Zhou, Ming-Bing;Pan, Chun-Fang;Hänninen, Heikki;Tang, Ding-Qin;Vinod, Kunnummal Kurungara; |
| Journal | mobile dna |
| Year | 2019 |
| DOI |
10.1186/s13100-019-0179-y
|
| URL | |
| Keywords | Keywords not found |
Citations
No citations found. To add a citation, contact the admin at info@scimatic.org
Comments
No comments yet. Be the first to comment on this article.