in silico structure analysis and epitope prediction of e3 cr1-beta protein of human adenovirus e for vaccine design
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ID: 213038
2016
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Abstract
Background: Human Adenoviruses are divided into 7 species of Human Adenovirus A to G based on DNA genome homology. The Human Adenovirus E (HAdVs-E) genome is a linear, double-stranded DNA containing 38 protein-coding genes. Wild-type adenoviruses type E, are linked to a number of slight illnesses. The most important part of HAdVs-E is E3 CR1-beta protein which controls the host immune response and viral attachment.
Method: We use numerous bio-informatics and immuno-informatics implements comprising sequence and construction tools for construction of 3D model and epitope prediction for HAdVs-E.
Results: The 3D structure of E3 CR1-beta protein was generated and total of ten antigenic B cell epitopes, 6 MHC class I and 11 MHC class II binding peptides were predicted.
Conclusion: The study was carried out to predict antigenic determinants/epitopes of the E3 CR1-beta protein of Human Adenovirus E along with the 3D protein modeling. The study revealed potential T-cell and B-cell epitopes that can raise the desired immune response against E3 CR1-beta protein and useful in developing effective vaccines against HAdVs-E.
| Reference Key |
patwary2016biomedicalin
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|---|---|
| Authors | ;Noman Ibna Amin Patwary;Md. Saiful Islam;Md. Sohel;Ismot Ara;Mohd. Omar Faruk Sikder;Shah Md. Shahik |
| Journal | osteoarthritis and cartilage |
| Year | 2016 |
| DOI |
10.1016/j.bj.2016.11.004
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