Metagenomic microbial community profiling using unique clade-specific marker genes

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ID: 115741
2012
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Abstract
Metagenomic shotgun sequencing data can identify microbes populating a microbial community and their proportions, but existing taxonomic profiling methods are inefficient for increasingly large data sets. We present an approach that uses clade-specific marker genes to unambiguously assign reads to m …
Reference Key
n2012naturemetagenomic Use this key to autocite in the manuscript while using SciMatic Manuscript Manager or Thesis Manager
Authors Segata N;Waldron L;Ballarini A;Narasimhan V;Jousson O;Huttenhower C;;
Journal Nature Methods
Year 2012
DOI
DOI not found
URL
http://www.ncbi.nlm.nih.gov/pubmed/22688413
Keywords
National Center for Biotechnology Information NCBI NLM MEDLINE humans pubmed abstract nih national institutes of health national library of medicine reproducibility of results research support u.s. gov't non-p.h.s. N.I.H. Extramural Phylogeny* bacteria / isolation & purification bacteria / classification* pmid:22688413 pmc3443552 doi:10.1038/nmeth.2066 nicola segata levi waldron curtis huttenhower bacteria / genetics* genetic markers / genetics* metagenomics*

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